PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003147.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB
Protein Properties Length: 216aa    MW: 25412.9 Da    PI: 10.4645
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003147.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.98.6e-17552148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               +g+WT+eEd ll ++++++G g+W++++   g++R++k+c+ rw++yl
  Rmu_sc0003147.1_g000008.1  5 KGSWTKEEDHLLRNYIEKHGQGRWHKVPLQAGLNRCRKSCRMRWLNYL 52
                               799*******************************************97 PP
2Myb_DNA-binding34.45.2e-115899144
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                               +g + ++E +l +++ k+lG++ W++Ia +++ gRt +++k++w
  Rmu_sc0003147.1_g000008.1 58 KGDFAEDEVDLMIRLRKLLGNR-WSLIAGRLP-GRTSNDVKNYW 99
                               57788999**************.*********.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MEVRKGSWTK EEDHLLRNYI EKHGQGRWHK VPLQAGLNRC RKSCRMRWLN YLKPNIKKGD  60
FAEDEVDLMI RLRKLLGNRW SLIAGRLPGR TSNDVKNYWS ARGRRNINFS FTKNYKHPEI  120
TKTTIIRPRP RTFTKSLHYL SAKATTSKPI NLENSSLSTS PPMQNGNEEW KTLLEEDVLT  180
NFWNEDTVSM SSMGVNSTQQ GFEMDLWHFL QEEARQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.18e-53MYB family protein