PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003207.1_g000019.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HB-other

Protein Properties

Length: 191aa MW: 20829 Da PI: 7.1451

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003207.1_g000019.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.2	7.6e-05	30	49	2	21
T--SS--HHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek 21 ++R+ +t++q+++L+elF++ Rmu_sc0003207.1_g000019.1 30 STRWIPTTDQIRILKELFYN 49 58****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MEPQNRQPTE DGGSNKAAGS SANMLRRKSS TRWIPTTDQI RILKELFYNK GVRDVHVPMK 60 HEDQYINFRS SARASASSAG VMISFNGQMG NYGGYGSMNM EKSSRNCSIS AGGGTSSTFF 120 DMNGEQTFME QRGEDHQEIE TLPLFPVHGE DIFGNMKTTS DGGGGHGGGS HTSLELSLSC 180 EGKAEKIFRS R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	4e-08	WOX family protein