PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003226.1_g000028.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 197aa MW: 22791.1 Da PI: 9.7236

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003226.1_g000028.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.7	4.1e-23	34	118	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 fYn+YAke+GFs+r ++s ++k+n + +++++vC+k+g ++ + +k r+r ++gCka++ v ++k +g++ ++ +++ Rmu_sc0003226.1_g000028.1 34 FYNRYAKEAGFSIRSHSSATNKDNSQLMRKEYVCYKQGDSKVQGEK-----RKRGLPKMGCKARIAVVRKKeSGRYAISVFVEG 112 *************************************9998777.....999*******9888777******** PP FAR1 85 HnHela 90 HnH l+ Rmu_sc0003226.1_g000028.1 113 HNHLLT 118 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MESEDDQVYI PQVKAELMPK LYQEFETIDD VVAFYNRYAK EAGFSIRSHS SATNKDNSQL 60 MRKEYVCYKQ GDSKVQGEKR KRGLPKMGCK ARIAVVRKKE SGRYAISVFV EGHNHLLTSP 120 PRVHLLRSHR RVSEVNIVLS QQLSLVNVGK HKQFEFFGVQ ACGIQNIGFI QRDLYNYGRT 180 CREEKKGHDG DLLYMHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-24	FAR1 family protein