PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003237.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 193aa    MW: 21465.1 Da    PI: 8.6251
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003237.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.12.6e-173190356
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                               +R+ +t++q+++L+el+     + p+ e+ ++++ +l    +++ ++V++WFqN+Ra+ek
  Rmu_sc0003237.1_g000003.1 31 TRWLPTTDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFQNQRAREK 90
                               7*****************6579*************************************9 PP
2Wus_type_Homeobox97.51e-313093365
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               +tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k+
  Rmu_sc0003237.1_g000003.1 30 NTRWLPTTDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAREKLKK 93
                               79****************999****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEPQNRHPTE DGGSNKAVES SPNMHCKQCN TRWLPTTDQI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVFY WFQNQRAREK LKKKNLTSDV QVPKQRSGLV GGSINLNFGS  120
TSSADVGGSI MEQGGEDHQE VKTLPLFPMH SEDIFGNMKT TSDGGGCHGG GSYISLELSL  180
SCEGKAGKSF RSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.16e-28WOX family protein