PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003244.1_g000030.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 333aa    MW: 36371 Da    PI: 6.508
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003244.1_g000030.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA52.19.2e-17227261135
                       GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                                C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  Rmu_sc0003244.1_g000030.1 227 CLHCASEKTPQWRTGPMGPKTLCNACGVRYKSGRL 261
                                99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MELPEFYVGG YFDGQLSTEK RQLADQKPAG GEQFTIDDLL DFSNEDALVT DGFFDSTVAG  60
NSTDSSTVTA VDSCNSSVSG GEPQFSGNRS FGDSQFSGDL CVPYDDLAEL EWLSNFVEDS  120
FSVDKDLQAL QILSTTTAKP QTPETSSSSA ETPQNPPLFH HETPLPGKAR SKRSRAAPGD  180
WTTRLLHLIP PNNSSEPKPA PKTTTSSQKK REGGSCNSGS DSSGRKCLHC ASEKTPQWRT  240
GPMGPKTLCN ACGVRYKSGR LVPEYRPAAS PTFVSARHSN SHRKVLELRR QKEFQRSHQH  300
QFLSPSSIFG VSNGGGDEFL IHHRGANDFR QMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.14e-74GATA family protein