PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003317.1_g000025.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C3H
Protein Properties Length: 109aa    MW: 12221 Da    PI: 8.3807
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003317.1_g000025.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.21e-062946523
                               --SGGGGTS--TTTTT-SS CS
                    zf-CCCH  5 lCrffartGtCkyGdrCkF 23
                               +C ++a+ G+Ck G +C+F
  Rmu_sc0003317.1_g000025.1 29 PCLYYAK-GYCKNGTSCRF 46
                               8******.*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 109 aa     Download sequence    
MFFSHLHRRS CSVSNVCLED PNSGFEWKPC LYYAKGYCKN GTSCRFLNGG IGDLGSDGAP  60
LVGSPSKLEM MDRSCHEVLL RSKSYFQTDI FTVPSVIFVA HFHRSATFK