PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003465.1_g000032.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 266aa    MW: 29614.8 Da    PI: 7.5535
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003465.1_g000032.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.63.2e-163191357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +R+t+t++q+++L+el++    + p+ae+++++  +l    +++ ++V++WFqN +a+e++
  Rmu_sc0003465.1_g000032.1 31 TRWTPTTDQIRILKELYYDkgVKSPTAEQIQRIYLQLnrygKIEGKNVFFWFQNLKARERQ 91
                               7****************96579*************************************97 PP
2Wus_type_Homeobox99.62.4e-323092364
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                                tRWtPt++Qi+iL+ely+ +G+++P++e+iqri  +L++yGkie+kNVf+WFQN kaRerq+
  Rmu_sc0003465.1_g000032.1 30 GTRWTPTTDQIRILKELYYdKGVKSPTAEQIQRIYLQLNRYGKIEGKNVFFWFQNLKARERQQ 92
                               58***************9889****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
METQTQQPTE DGGSNKAARS GANMLRRWSG TRWTPTTDQI RILKELYYDK GVKSPTAEQI  60
QRIYLQLNRY GKIEGKNVFF WFQNLKARER QQKRLTSDVH VPMQRSGPVG GSINLNFGST  120
SSTCVGGSID LNVDPYSSSS FTSSTSTTFL DMKEEQTVME QRGEDHQEIE TLPLFPMHGE  180
DIFGDMKTTS EGGSGYGYYS GGWGGYNGGS RISLELSLNY SGAADGYGYY SGGWGGYNGG  240
SRISLELSLN CFGKEKFFLF FLNKKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-29WOX family protein