PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003499.1_g000007.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NF-YB

Protein Properties

Length: 215aa MW: 23415.8 Da PI: 7.6992

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003499.1_g000007.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179	4.2e-56	26	121	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 +eqdrflPianvsrimkk lPanakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plk Rmu_sc0003499.1_g000007.1 26 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKG 109 89******************************************************************************** PP NF-YB 86 ylkkyrelegek 97 yl+kyre+egek Rmu_sc0003499.1_g000007.1 110 YLNKYRETEGEK 121 ********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MSGKRKQTSP VGSPLSGGNV SDGGSKEQDR FLPIANVSRI MKKSLPANAK ISKEAKETVQ 60 ECVSEFISFI TGEASDKCQR EKRKTINGDD LLWAMTTLGF ENYVGPLKGY LNKYRETEGE 120 KNSMTRGQED HNHSSNDGHH INNNNQVHNG TNEINTVGTN KVDFFNNGGF YSLGGQQMSA 180 PKGFGESGRV IGYGDQTLVA YGDGNANHLH NGIGW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14540.1	4e-64	NF-YB family protein