PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003500.1_g000012.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 170aa    MW: 19047.5 Da    PI: 9.7338
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003500.1_g000012.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox45.99.5e-15767256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t +q+++L+el+     + p+ e+ ++++ +l    +++ ++V++WFqN+ a+ek
  Rmu_sc0003500.1_g000012.1  7 NTRWLLTIDQIRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFQNQMAREK 67
                               58*****************6579************************************98 PP
2Wus_type_Homeobox87.81.1e-28670265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW  t +Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN+ aRe+ k+
  Rmu_sc0003500.1_g000012.1  6 SNTRWLLTIDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFQNQMAREKLKK 70
                               689****************999****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MHCEQSNTRW LLTIDQIRIL KELYDDKGVK SPTVEQVQRI TLQLKWYGQI ENKNVFYWFQ  60
NQMAREKLKK KKLTSDVQVP KKRSGLVGGS TNLNFGSTNS AGVGGSIMEQ RGEDHQEIKT  120
FPLFPMHGED LFGNIKTTSD GGGGHGGGSH TSLELSLSCE GKAEKSFRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.11e-25WOX family protein