PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003510.1_g000014.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 536aa MW: 58347.3 Da PI: 7.6118

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003510.1_g000014.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.5	1e-06	176	238	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r rr NRe+Ar +R++a +e L++k++ L eN++Lk + + k++++l+ + Rmu_sc0003510.1_g000014.1 176 EKEERRIRRILANRESARQTIRRRQALCEDLTKKAADLALENESLKRKKDLALKQYQSLEETN 238 78999****************************************************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MVCSEATTRS FASSSSSEAG AAEASSSSSS SVSAGGGGEA DPMMVKEELE AAEALADLAH 60 LAMRENSGAE SAGNWGLKGK RAKKRVKSES PPTLSGSNPV PACPDLPQDQ AVIGPAQCER 120 VCTNVVGEPV KTELVMNKKI AKSEHDAELT TSTPICTTSY PSFSCTKSRR NLTEEEKEER 180 RIRRILANRE SARQTIRRRQ ALCEDLTKKA ADLALENESL KRKKDLALKQ YQSLEETNRL 240 LKVQMAKARK TEVEEPPDEN MSAYVQIPSS SPTNPPLFLF NRPPFTPVFW PSIIQSSNSI 300 QLQQVPQNPM ATPSNISLPC NGTADSSHEL GNPINVNGSR TPLYVFPCPW FFPHFDNGNG 360 LQPQSSCLEN KKEGAFFNNQ CSASSSSRTA AQLDNNQSTF PVRLDTEASG SMEAGPRTDL 420 NENPAQFPLD GGDQHTGFHP KENGSREIFL SPLLNHGGVA STIKHENGLE SDFSANTEKS 480 STACHPFSSL PEKNSEPIIY PSRKIADAIA AAEARKRRKK LTKLKNLHGR QCRMQC

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MVCSEATTRS FASSSSSEAG AAEASSSSSS SVSAGGGGEA DPMMVKEELE AAEALADLAH  60
LAMRENSGAE SAGNWGLKGK RAKKRVKSES PPTLSGSNPV PACPDLPQDQ AVIGPAQCER  120
VCTNVVGEPV KTELVMNKKI AKSEHDAELT TSTPICTTSY PSFSCTKSRR NLTEEEKEER  180
RIRRILANRE SARQTIRRRQ ALCEDLTKKA ADLALENESL KRKKDLALKQ YQSLEETNRL  240
LKVQMAKARK TEVEEPPDEN MSAYVQIPSS SPTNPPLFLF NRPPFTPVFW PSIIQSSNSI  300
QLQQVPQNPM ATPSNISLPC NGTADSSHEL GNPINVNGSR TPLYVFPCPW FFPHFDNGNG  360
LQPQSSCLEN KKEGAFFNNQ CSASSSSRTA AQLDNNQSTF PVRLDTEASG SMEAGPRTDL  420
NENPAQFPLD GGDQHTGFHP KENGSREIFL SPLLNHGGVA STIKHENGLE SDFSANTEKS  480
STACHPFSSL PEKNSEPIIY PSRKIADAIA AAEARKRRKK LTKLKNLHGR QCRMQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	9e-55	bZIP family protein