PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003511.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 137aa    MW: 15787.1 Da    PI: 7.411
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003511.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.53.6e-111295183
                               EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEE CS
                         B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFk 83
                               f+k+lt+ dv    rlv+ k+    + + ++e ++ +++ d +g  ++++l++rk+++   ++ ++GWk F    g+k+gDf+ F 
  Rmu_sc0003511.1_g000009.1 12 FVKKLTQTDVDD--RLVVTKEMGLMMpDADPEHDTLIRVLDDEGDDYQFYLSVRKGRNLkpVFQAQGWKAFITKRGVKVGDFICFW 95
                               899999999985..599999999888988899999****************88777776878888******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MELEYLRGRP KFVKKLTQTD VDDRLVVTKE MGLMMPDADP EHDTLIRVLD DEGDDYQFYL  60
SVRKGRNLKP VFQAQGWKAF ITKRGVKVGD FICFWPEVNA IKRTDYRIKL FPFTCYLSPN  120
PEGLSSSKPS APADEHA