PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003537.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 133aa MW: 15160.9 Da PI: 9.7549

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003537.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1.1e-17	30	90	2	56
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+ +t++q+++L+el+ + + p+ e+ ++++ +l +++ ++V++WFqN+Ra+ek Rmu_sc0003537.1_g000002.1 30 NTRWLPTRDQIRILKELYDEkgVKSPTVEQVQRITLQLkwygEIENKNVFYWFQNQRAREK 90 58***************7679***********************************9 PP
2	Wus_type_Homeobox	96.1	2.9e-31	29	92	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 ++tRW Pt +Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k Rmu_sc0003537.1_g000002.1 29 SNTRWLPTRDQIRILKELYDeKGVKSPTVEQVQRITLQLKWYGEIENKNVFYWFQNQRAREKLK 92 789**************989*************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 133 aa Download sequence
MEPQNRHPTE DGGSNKAAES SPNMHCTQSN TRWLPTRDQI RILKELYDEK GVKSPTVEQV 60 QRITLQLKWY GEIENKNVFY WFQNQRAREK LKNNKLTSDT TSDGGGGHGG GSYISLELSL 120 SCEGKARKSF RSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-25	WOX family protein