PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003547.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family E2F/DP
Protein Properties Length: 247aa    MW: 27180.8 Da    PI: 9.9237
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003547.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP53.15.5e-1765130864
                    E2F_TDP   8 lltqkflkllek..seegivtlnevakeLvse.......dvknkrRRiYDilNVLealnliekkek 64 
                                 l+q+f+kl+ +  se++ ++++e+ak L+          +++k+RRiYDi+NVL+++nliek++ 
  Rmu_sc0003547.1_g000004.1  65 SLAQNFVKLFVCtgSESKSISIDEAAKLLLGVgdaqnisVMRTKVRRIYDIANVLSSVNLIEKTHT 130
                                47899999887754777************87788****999**********************543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MATSSYLETP QTSRKSKNTY TWNGFGAVPN ALKELREEGL DLTPIPVTCN NNNNNPLDET  60
KREKSLAQNF VKLFVCTGSE SKSISIDEAA KLLLGVGDAQ NISVMRTKVR RIYDIANVLS  120
SVNLIEKTHT ANTGKLAYRL LGLNGRRDGL NLNSEPNLEQ AMKRSFGTDL MDASSKRSKV  180
VEKRVQDQGE VENWNSDGCG AKESSKSYQF GPFAPGAFQE LGRVLTSTRF AGRVLGLIIS  240
LSIRTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.13e-39E2F/DP family protein