PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003556.1_g000029.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 207aa    MW: 23564.6 Da    PI: 9.7766
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003556.1_g000029.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP77.53.8e-24145206263
                        TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikelt 63 
                                + +kdrhsk++T++g++d    l a++a +f+d+qd+LG+d++s +++WL+++ak+ i+el+
  Rmu_sc0003556.1_g000029.1 145 TYRKDRHSKVCTAKGPKDHPAWLAAHTANQFYDVQDRLGYDRPSMAVDWLIKKAKATIDELP 206
                                679*********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MVCFIESLAE SETPLEITEL SSGSIRFNIL AITENPRSKP DFLVETNSSD TPPPQTPEMR  60
HQIVEAEQAR RRRWARKEGS NWRARSQGKK TRRLEENCKS TFPAKFSREP PLMEGLFSSK  120
GGPWIASSST ASEIVEARDH ILRATYRKDR HSKVCTAKGP KDHPAWLAAH TANQFYDVQD  180
RLGYDRPSMA VDWLIKKAKA TIDELPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.24e-32TCP family protein