PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003558.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 168aa    MW: 19139 Da    PI: 9.6179
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003558.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.25.1e-29959151
                               S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
                     SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                               krie+k++rqvtfskRr+g++KKA ELSvLC++ev +iifs +g+lye++s
  Rmu_sc0003558.1_g000005.1  9 KRIEDKIRRQVTFSKRRTGLMKKARELSVLCGVEVGLIIFSAKGRLYEFCS 59
                               79***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MGRGKVQLKR IEDKIRRQVT FSKRRTGLMK KARELSVLCG VEVGLIIFSA KGRLYEFCSG  60
DRKDGYLPEA PSLGEEASMH GWPKPMDTDM FDDTERHSWK DITPAWAVGS NYCLTAVGML  120
PGACDSLLQS RRADFGQQVS RRAPERPVVS MSHFEFDRCH WVVNKPFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03710.32e-27MIKC_MADS family protein