PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003610.1_g000044.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 196aa MW: 21645.8 Da PI: 10.3201

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003610.1_g000044.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	83.7	4.4e-26	37	127	5	83
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssasec..e 74 drhsk++T +++ dRRv++ a++a++f+d+qd LG+d sk+++WL++++k+ai++l ++ + s+ + Rmu_sc0003610.1_g000044.1 37 IDRHSKVCTTKSPTDRRVCVAAHTAIQFYDVQDWLGYDWLSKAVDWLIKKSKAAIDKLDELplwnrnsisiqtT--SSPTVpiF 118 59***********************************************************8877777666421..22112232 PP TCP 75 aesssssas 83 a++++++as Rmu_sc0003610.1_g000044.1 119 AAQDKQNAS 127 222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MGESHNNLHH RATTSSSVAS RLGLGIRTAS SSTASEIDRH SKVCTTKSPT DRRVCVAAHT 60 AIQFYDVQDW LGYDWLSKAV DWLIKKSKAA IDKLDELPLW NRNSISIQTT SSPTVPIFAA 120 QDKQNASLHF SMVEAPSSLS TNRRGAMVAS SRVAKLVNQN SSNFLQVRMV WRPKLLIFVC 180 LQLPLIKVGI EVEVVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-29	TCP family protein