PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0003636.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

GRAS

Protein Properties

Length: 139aa MW: 16515 Da PI: 8.4867

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0003636.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	106.7	3.2e-33	3	137	221	354
GRAS 221 eserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegae 304 +s+rd vLkl+k+++P+++++ ++ hn++ F++r+ eal +y a+fd +ea+ p+e++ +++E+ + gr+i+n++aceg e Rmu_sc0003636.1_g000008.1 3 NSPRDVVLKLIKNINPNLFIHGIRNGTHNTPFFATRIREALLHYYAVFDVFEATNPHEENRWMMLEKDFHGRDIMNIIACEGVE 86 4689************************************************9************************* PP GRAS 305 rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee 354 r+er et++kW+ r +aG+k++pl+ + k+ak l + ++ + +r++e+ Rmu_sc0003636.1_g000008.1 87 RVERPETYKKWQIRNVRAGLKQLPLDRELLKKAKKLSELMGyHNDFRLDED 137 ***********************************999999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence
MENSPRDVVL KLIKNINPNL FIHGIRNGTH NTPFFATRIR EALLHYYAVF DVFEATNPHE 60 ENRWMMLEKD FHGRDIMNII ACEGVERVER PETYKKWQIR NVRAGLKQLP LDRELLKKAK 120 KLSELMGYHN DFRLDEDGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07520.1	2e-47	GRAS family protein