PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003642.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 244aa    MW: 28063.6 Da    PI: 9.4327
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003642.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.42.7e-12104155550
                    G2-like   5 rWtpeLHerFveaveqLGG..sekAtPktilelmkv....kgLtlehvkSHL 50 
                                 Wt e H+r veav qLGG  s k+tPk++l+lm+     +gLt + ++ HL
  Rmu_sc0003642.1_g000002.1 104 SWTLEHHRRVVEAVIQLGGlgSSKTTPKAVLKLMDEedrrQGLTTKMIAHHL 155
                                7*****************63379***********96333369******9998 PP
2Myb_DNA-binding26.91.1e-08104156345
                                SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.....TTS-HHHHHHHHH CS
            Myb_DNA-binding   3 rWTteEdellvdavkqlGgg.....tWktIartmg.....kgRtlkqcksrwq 45 
                                +WT e + + v+av qlGg      t+k++ + m      +g+t k++ ++++
  Rmu_sc0003642.1_g000002.1 104 SWTLEHHRRVVEAVIQLGGLgssktTPKAVLKLMDeedrrQGLTTKMIAHHLL 156
                                7*****************88*******************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MSRLGVEGDR RATTSPRTFE WTLEHHKKCV DTFIFLGGDK EKVGVHNALK AELLSLTGCC  60
CRISYLDFHI SFLGLLQKSS EALFSSNKVT LESLYVAPQK MSSSWTLEHH RRVVEAVIQL  120
GGLGSSKTTP KAVLKLMDEE DRRQGLTTKM IAHHLLGLYH LQKETQRVIA FGLAGGEEER  180
ELALWELRYL VFREFPQLRN IFLYTNVKDP LLRQHLGLLK QVNMSHRIRL QIMKSEWEVS  240
RAFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.41e-06G2-like family protein