PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003684.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 257aa    MW: 28682 Da    PI: 9.4054
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003684.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.81.9e-3184138155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                k+r+rW+++LHe+Fve+v++LGG++kAtPk+il++m+++gLt+ hvkSHLQkYR+
  Rmu_sc0003684.1_g000001.1  84 KTRIRWNQDLHEKFVECVNRLGGADKATPKAILKMMGLEGLTIFHVKSHLQKYRI 138
                                68****************************************************7 PP
2Myb_DNA-binding50.45e-1688137348
                                SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                rW ++++e++v++v++lGg    t+k+I ++mg +g+t  ++ks++qky+
  Rmu_sc0003684.1_g000001.1  88 RWNQDLHEKFVECVNRLGGAdkaTPKAILKMMGlEGLTIFHVKSHLQKYR 137
                                9*****************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
SQSYKSSEKS DQIPSNHLPG SKLFLHQDST SGSVRRPFSL AFKENQEQVS FFSQQAKQSP  60
RTSSGTVSAA SGDSSSTSPS LSSKTRIRWN QDLHEKFVEC VNRLGGADKA TPKAILKMMG  120
LEGLTIFHVK SHLQKYRIAK YLPDSAEGKS EKRANVNVEP QLDVKTGLQI KEALQLQLDV  180
QRQLHEQLEI QRNLQLRIEE QGERLKKMFD LQQKTSDSTL KTPNVDFTCH ENGPSDNEIQ  240
VSSPEGSGNS HFPSKIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.15e-71G2-like family protein