PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003704.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 157aa    MW: 18400.2 Da    PI: 10.5779
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003704.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1515.9e-47111371128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                                lp+GfrFhPt+eelv++yLkkkv+g +  e++++i+e+d++k+eP +Lp   +a++ ew+fF++r+ ky++++r+nr+tk+gyW
  Rmu_sc0003704.1_g000007.1  11 LPVGFRFHPTEEELVNHYLKKKVHGGNdSEINQIIREIDLCKYEPAELP---EARDMEWFFFTRRAYKYNKSSRSNRSTKKGYW 91 
                                79**********************9985667778***************...45889*************************** PP

                        NAM  84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                k tgk++ ++++ +++++g kktL+fy+gr pk++kt+Wv+hey l
  Rmu_sc0003704.1_g000007.1  92 KITGKERGIKARrSKAVIGKKKTLTFYQGRVPKSKKTSWVIHEYYL 137
                                **********98566779**************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MSSERTTPLS LPVGFRFHPT EEELVNHYLK KKVHGGNDSE INQIIREIDL CKYEPAELPE  60
ARDMEWFFFT RRAYKYNKSS RSNRSTKKGY WKITGKERGI KARRSKAVIG KKKTLTFYQG  120
RVPKSKKTSW VIHEYYLPGN GVIKQAQVSL YFSLSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.14e-37NAC family protein