PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003720.1_g000009.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 281aa    MW: 32835.9 Da    PI: 5.0751
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003720.1_g000009.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.22.2e-21161502128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka.......eekewyfFskrdkkyatgkrknr 76 
                                 pG rF P ++elv +y k+ ++g+k++  +  + ++d+y + ePw++ +++k+        +k++yfF+++++ ++t++r +r
  Rmu_sc0003720.1_g000009.1  16 LPGERFCPMEDELVLFYVKPMLSGEKVPGRNRvVFDCDLYGHqEPWEIWEAYKTrrpndlrLNKDIYFFTQHKTMSSTDTRIRR 99 
                                589***********************8775544999****8879****743333234333334588****************** PP

                        NAM  77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                ++ +g+Wk   + k+v+s  +g++vglkk L++ + +a++ ++  W++ e+ l
  Rmu_sc0003720.1_g000009.1 100 TVGNGTWKGDDSGKPVKSLeTGRVVGLKKRLTYKN-QASE-HNGCWILYEFYL 150
                                ********9999999988668999********984.3333.6999*****976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MQQEFAVEES RGNLQLPGER FCPMEDELVL FYVKPMLSGE KVPGRNRVVF DCDLYGHQEP  60
WEIWEAYKTR RPNDLRLNKD IYFFTQHKTM SSTDTRIRRT VGNGTWKGDD SGKPVKSLET  120
GRVVGLKKRL TYKNQASEHN GCWILYEFYL DPSLRDKKQK VEDYVLCLLR KNGEPKAKIK  180
KRRKQREEED VLENNYACDD GESTNKEQPQ AKRQRMGEQN GGLQHFVSEV QSGDDHGMLI  240
PLPEEDFLWE EMLQQMGIGD DHGIPEEDFL WEDILQQIGS N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1180184KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.28e-15NAC family protein