PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003720.1_g000023.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 160aa    MW: 18237.7 Da    PI: 7.7013
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003720.1_g000023.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR177.13.4e-2426111290
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 
                                 Yn+YA + GFs+rk + ++   +g++  r+f+C keg+++++++  e++r ++ etrtgCka+++     dg w ++++++eH
  Rmu_sc0003720.1_g000023.1  26 LYNNYALRKGFSIRKGHIRRD-ASGNVRLREFMCAKEGFARDQDTF-EHKRYKKLETRTGCKAMIVFIVA-DGIWTISHINSEH 106
                                7****************9998.8888****************9999.999***************99999.************* PP

                       FAR1  86 nHela 90 
                                nH+la
  Rmu_sc0003720.1_g000023.1 107 NHDLA 111
                                ***97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MEEIAGEDGE LKPGMQVYSD DEAYNLYNNY ALRKGFSIRK GHIRRDASGN VRLREFMCAK  60
EGFARDQDTF EHKRYKKLET RTGCKAMIVF IVADGIWTIS HINSEHNHDL ARPEERQFLK  120
SGRKVLEAHG NVMLSMLGAG IPPTKSFFYL ANEMGGPEVH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.13e-17FAR1 family protein