PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003747.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 96aa    MW: 10577.2 Da    PI: 7.5065
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003747.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.87.3e-09531127
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkk 27
                               +p+G+rFhPtdeel+ +yL  k + ++
  Rmu_sc0003747.1_g000001.1  5 VPMGVRFHPTDEELIEHYLYLKNNPNS 31
                               599****************98876655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MDHCVPMGVR FHPTDEELIE HYLYLKNNPN SDPNPILGNL EVNFSFAGGE SVQALEASSK  60
IFSGRGRAVY KTFHMSCIVF CALASKGMLN GIKKVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.16e-07NAC family protein