PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003809.1_g000026.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 196aa    MW: 21715.2 Da    PI: 9.1351
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003809.1_g000026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.91.5e-173090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t++q+++L++l+     + p+ e+ ++++ +l    +++ r+V++WFqN+Ra+ek
  Rmu_sc0003809.1_g000026.1 30 NTRWLPTTDQIRILKKLYDDkgVKSPTVEQVQRITLQLkwygQIENRNVFYWFQNQRAREK 90
                               58*****************6579*************************************9 PP
2Wus_type_Homeobox95.25.7e-312993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++tRW Pt++Qi+iL++ly+ +G+++P+ e++qrit +L+ yG+ie++NVfyWFQN++aRe+ k+
  Rmu_sc0003809.1_g000026.1 29 SNTRWLPTTDQIRILKKLYDdKGVKSPTVEQVQRITLQLKWYGQIENRNVFYWFQNQRAREKLKK 93
                               789****************999****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MEPQNRHPTE DGGSNKAAES SPNMHCKQSN TRWLPTTDQI RILKKLYDDK GVKSPTVEQV  60
QRITLQLKWY GQIENRNVFY WFQNQRAREK LKKKNLTSDV QVPEQRSGLV GESINLNFGS  120
TSSAGVGGSI MEQRREDHQE IKTLPLFPMH SEDIFGNMRT TSDGGGGHGG GSHTSLKLSL  180
SCEGKAEKVS GAADSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.14e-27WOX family protein