PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003850.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 198aa    MW: 22204.7 Da    PI: 7.6931
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003850.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-1065105954
                                HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                        HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                 r RR+ri ++f  L++l+P       +Kl+ +++Le+A++Y+k L
  Rmu_sc0003850.1_g000005.1  65 ARERRHRISERFKILQSLVPGG-----TKLDTVSMLEEAIQYVKFL 105
                                699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEFYFPASSD GSNFSSSSVI TNTNTNNINI NGGRNKDKMK KSTSGNDQKS KNKVKLSTDP  60
QSVAARERRH RISERFKILQ SLVPGGTKLD TVSMLEEAIQ YVKFLKSQIW LHQTMINFAG  120
DDDTQYYDHD PTSGNVFQLP VHHGHPVDPP HQQALCYGQN SFVGTSSVQP SVPVMPEYSC  180
FQGQEATPNI EAYMKYYS