PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003852.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family BES1
Protein Properties Length: 323aa    MW: 34975.1 Da    PI: 9.0238
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003852.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222205.1e-6851541148
                     DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaags 84 
                                g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqG yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+   e+ag+
  Rmu_sc0003852.1_g000007.1   5 GSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGSYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGCKPP--IEIAGT 86 
                                689*************************************************************************..9***** PP

                     DUF822  85 sasaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                                 +++s +ss+q s++ss+++spv+sy+asp+sssfpsp+++d ++++ +    + llp+l++l++++ 
  Rmu_sc0003852.1_g000007.1  87 PTNMSACSSMQPSPQSSSFPSPVPSYHASPSSSSFPSPTRFDGNPSSYHqnpsSYLLPFLHNLASIPT 154
                                ******************************************99987666788889999999887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MTGGGSSGRL PTWKERENNK RRERRRRAIA AKIYSGLRAQ GSYKLPKHCD NNEVLKALCA  60
EAGWVVEEDG TTYRKGCKPP IEIAGTPTNM SACSSMQPSP QSSSFPSPVP SYHASPSSSS  120
FPSPTRFDGN PSSYHQNPSS YLLPFLHNLA SIPTNLPPLR ISNSAPVTPP LSSPTSRGSK  180
RKPDWESLTN GCINSLRHPL FAASAPSSPT RRHHLAPATI PECDESDAST VDSGRWVSFQ  240
TGVPSVAPPS PTFNLMKPVA EQNVLQQTVV GHGGIGWGNP VERARGSEFE FESGRLKAWE  300
GERIHEVGVE DLELTLGNGK MHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-89BES1 family protein