PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003859.1_g000032.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 196aa    MW: 21630.2 Da    PI: 8.0976
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003859.1_g000032.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox51.81.4e-163190356
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                               +R+ +t++q+++L+el+     + p+ e+ ++++ +l    +++ ++V++WFqN+Ra+ek
  Rmu_sc0003859.1_g000032.1 31 TRWLPTTDQIRILKELYDDkgVKSPTVEQVQRITLQLkwyrQIENNNVFYWFQNQRAREK 90
                               7*****************6579*************************************9 PP
2Wus_type_Homeobox89.43.6e-293093365
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               +tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ y +ie++NVfyWFQN++aRe+ k+
  Rmu_sc0003859.1_g000032.1 30 NTRWLPTTDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYRQIENNNVFYWFQNQRAREKLKK 93
                               79****************999****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MEPQNRHPTE DGGSNKAAES SPNMHCKQCN TRWLPTTDQI RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY RQIENNNVFY WFQNQRAREK LKKKNLTSDV QVPKQRLGLV GGSINLNFGS  120
TSSADVGGSI MEQRGEDHQE VKTLPLFPMH SEDIFGNMKT TSDGGGGHGG SSHISLELSL  180
SCEGKAGKVS GAADSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.19e-26WOX family protein