PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003877.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 243aa    MW: 28017.5 Da    PI: 6.2813
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003877.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.35.4e-31199653129
                        NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
                                 + +ewyfFs rd+kyatg r+nrat++gyWkatgkd+ v++  +g  vg++ktLvfy++rap+g kt W+mhe+rle
  Rmu_sc0003877.1_g000002.1  19 LNANEWYFFSFRDRKYATGFRTNRATTTGYWKATGKDRMVVDPgTGDIVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 96 
                                4678**************************************977888***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MQKLIGSVII FLYEEVAKLN ANEWYFFSFR DRKYATGFRT NRATTTGYWK ATGKDRMVVD  60
PGTGDIVGMR KTLVFYRNRA PNGIKTGWIM HEFRLETPHM PPKEDWVLCR VFHKGKGEMN  120
DNMNLSPHDL MLETKTSCTA ALTSPPTHHD QNMHCGYSNQ ITSFSTTPVP HQSHSHSHNN  180
QSNSLLNLLQ LSEEKYTDSI TEISAKNDDD YGFLWDMNLE ENSFETGTLD DMRFEMENSM  240
VLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.16e-61NAC family protein