PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003878.1_g000041.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 217aa    MW: 25685.9 Da    PI: 6.2658
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003878.1_g000041.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.22.5e-17213311128
                        NAM  11 deelvveyLkkkvegkklele.evikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyatgkrknr.atksgy 82 
                                ++el+++yLk+kv+g +++ + +vi e+d+y   +Pw++ +     k  +    ++k++y F++++kk+a+ +r +r + + g+
  Rmu_sc0003878.1_g000041.1   2 EDELLMFYLKPKVNGMEVPGNgDVICELDLYGDnDPWNIWErfearK--TndlrRNKDLYVFTQKKKKTAKRSRISRtVGSGGT 83 
                                689**************7765156******97549****64344442..1345456689******************4555889 PP

                        NAM  83 Wkatgkdkevlskkgel......vglkktLvfykgrapkgektdWvmheyrl 128
                                Wk +   ke++  ++++       g kkt ++   ++ + +  +W+m e++l
  Rmu_sc0003878.1_g000041.1  84 WKGQNAAKEIYLLDDNQqptttlLGFKKTYTYK--NKGSVHDGRWIMYEFEL 133
                                ***********9844443555669999999998..44455689*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MEDELLMFYL KPKVNGMEVP GNGDVICELD LYGDNDPWNI WERFEARKTN DLRRNKDLYV  60
FTQKKKKTAK RSRISRTVGS GGTWKGQNAA KEIYLLDDNQ QPTTTLLGFK KTYTYKNKGS  120
VHDGRWIMYE FELDKSQLMH KKQVNKNDYV LCLLMKNDVL PERKRKRQEE EEMLGDYVED  180
HDGDNVDPES VTEEPQEKRQ RLLPSLEAEQ EQFLHHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-13NAC family protein