PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003878.1_g000047.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 115aa    MW: 13456.4 Da    PI: 8.4285
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003878.1_g000047.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.13.6e-197110194
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel.eevikevdiykv.ePwdLpk.....kvka....eekewyfFskrdkkyatgkr 73 
                                l pG rF P ++el+++yLk+kv+g +++  e+vi e+d+y   +Pw++ +     k  a    ++k++yfF++++kk+a+++r
  Rmu_sc0003878.1_g000047.1   7 LLPGQRFFPMEDELLMFYLKPKVNGMEVPGnEDVICELDLYGDnDPWKIWErfearK--AndlrKNKDLYFFTQKKKKTAKSSR 88 
                                579************************7762467******97549****64344442..1345466689*************** PP

                        NAM  74 knr.atksgyWkatgkdkevls 94 
                                 +r + + g+Wk +   ke++ 
  Rmu_sc0003878.1_g000047.1  89 ISRtVGSGGTWKGQNAAKEIYL 110
                                ***4555889********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MEDGRMLLPG QRFFPMEDEL LMFYLKPKVN GMEVPGNEDV ICELDLYGDN DPWKIWERFE  60
ARKANDLRKN KDLYFFTQKK KKTAKSSRIS RTVGSGGTWK GQNAAKEIYL LDDNQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.11e-13NAC family protein