PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003927.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family HSF
Protein Properties Length: 127aa    MW: 14566.5 Da    PI: 6.5181
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003927.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind80.62.4e-2545103260
                                HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS
               HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 
                                Fl+k+y++++d+++++++sws+ g sfvv+d+++f  ++Lp+yFkh+nf+SFvRQLn+Y
  Rmu_sc0003927.1_g000001.1  45 FLNKTYDMVDDPSTNRIVSWSRGGGSFVVWDPHSFVMNLLPRYFKHNNFSSFVRQLNTY 103
                                9********************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MNYLYPVKEE YPGGSSSSQW SGDPLMTVAP PQPMEGLNDT GPPPFLNKTY DMVDDPSTNR  60
IVSWSRGGGS FVVWDPHSFV MNLLPRYFKH NNFSSFVRQL NTYVSVFTPQ SSNWLVEIFF  120
FRKVQMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G63350.11e-37HSF family protein