PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003936.1_g000028.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 207aa    MW: 23265.4 Da    PI: 4.9498
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003936.1_g000028.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.41.9e-069303455
                               TTS-STCHHHHHHHHHHHHHHH CS
                        HLH 34 pskKlsKaeiLekAveYIksLq 55
                               +s K +Ka++L +A+eY+k+Lq
  Rmu_sc0003936.1_g000028.1  9 NSNKTDKASMLDEAIEYLKQLQ 30
                               6889*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MLIWCRIPNS NKTDKASMLD EAIEYLKQLQ LQVQGRKQET EEEEGDGKDR RQRNPKEEKN  60
CYTSQIQDNL AVNFSRELAD YIIYIIDVSG GDKISRKGGP AITQADLLVC GFQIFTAAAF  120
VVDTIFYTVT DDNSAANFSR ELADYIVYII DVSGGDKIPR QGGPRITQAD LLDDCEVWKP  180
LSRIKSVPPT SRAKKACSKY WILLSSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67110.13e-12bHLH family protein