PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0003958.1_g000011.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 163aa    MW: 18339 Da    PI: 7.6346
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0003958.1_g000011.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.81.1e-14831621398
                                TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                         B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                s+++ +p +f +e+ +++ +  +l l + +g +++v+l    + ++++l++GW++F ++n+L+e D+++F+l++  e ++vv++
  Rmu_sc0003958.1_g000011.1  83 SKMVAVPTHFYREIFSSS-KYDELFLVTAKG-KFTVTL--LPCTDTVMLSGGWSSFRNDNQLQEDDICIFELVK--ENTMVVHI 160
                                456789********4443.334788887666.699999..*******************************986..6678**** PP

                                E- CS
                         B3  97 fr 98 
                                fr
  Rmu_sc0003958.1_g000011.1 161 FR 162
                                98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MARRACTSLP FHDGSVEEEK GPTFFKIIRP GVNTEHLVSD HRYDLAVEAA HVLKSKGEHL  60
PSYAAAAAFK SKFPYFAKVL AGSKMVAVPT HFYREIFSSS KYDELFLVTA KGKFTVTLLP  120
CTDTVMLSGG WSSFRNDNQL QEDDICIFEL VKENTMVVHI FRN