PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004015.1_g000021.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 136aa MW: 14591.2 Da PI: 9.5317

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004015.1_g000021.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.4	4.9e-08	6	25	38	57
TS-HHHHHHHHHHHHHHHHC CS Homeobox 38 gLterqVkvWFqNrRakekk 57 +++ ++V++WFqN++a++k+ Rmu_sc0004015.1_g000021.1 6 KIEGKNVFYWFQNHKARDKQ 25 6899**************97 PP
2	Wus_type_Homeobox	49.4	1.1e-16	1	27	39	65
Wus_type_Homeobox 39 LeeyGkiedkNVfyWFQNrkaRerqkq 65 L++yGkie+kNVfyWFQN+kaR++qk+ Rmu_sc0004015.1_g000021.1 1 LKRYGKIEGKNVFYWFQNHKARDKQKK 27 799**********************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence
LKRYGKIEGK NVFYWFQNHK ARDKQKKKIT SDVHVPMQRS GLVGNGTNWK PEDKYINFGS 60 SASASASSAG VGGSIKEIET LPLFPMHGED IFGNMKTTSE GGSGYVYYSG GSGGYNDGSR 120 ISLELSLNSS GAADLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	2e-12	WOX family protein