PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004074.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 226aa    MW: 25095.6 Da    PI: 4.9223
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004074.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-1859107355
                        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a++ ++g
  Rmu_sc0004074.1_g000008.1  59 YRGVRMRQ-WGKWVSEIREPRK---KSRIWLGTFETPEMAARAHDVAALTIKG 107
                                9****998.**********843...6**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MEEEQSTTAT SSSGSTTSAQ CEAGKISKRV KKQQVVENGS EKRAKSDGSE EGSKQHPMYR  60
GVRMRQWGKW VSEIREPRKK SRIWLGTFET PEMAARAHDV AALTIKGRSA YLNFPELAKE  120
LPRPDSSSPK DIQAAAAKAA AISYPNCSSS HEAHEAEEAQ PAQDSSTSPI SDDHNDDTFY  180
DLPDLLLDVG QYHGDHEYYF PVVTWQLGGA DPIDTSLRME ESFLWD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16750.12e-49ERF family protein