PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004082.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

SRS

Protein Properties

Length: 217aa MW: 23007.6 Da PI: 8.1632

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004082.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	100.1	4e-31	120	177	3	60
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaas 60 sg +C+dCGn+akk+C+++RCRtCC+ rg+dC+thv+stWvpaa+rrerq + a Rmu_sc0004082.1_g000020.1 120 SGMRACKDCGNRAKKGCEYSRCRTCCRGRGYDCSTHVRSTWVPAARRRERQMGVTVAV 177 57789*********************************************98776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MLGLRDILLI APNHSSVHQQ NQPISSDHPA LPLPSSTALG VGLGIFPLLT ATPCGQNAPT 60 ADGNPDNSRF WSLRTYPELN SSKQDMLSFG NHGAAESQQV AESDDGNVNG EGGGRGGEDS 120 GMRACKDCGN RAKKGCEYSR CRTCCRGRGY DCSTHVRSTW VPAARRRERQ MGVTVAVAGG 180 VASGGGGEGD SRSFVNIHLQ TTNRLGWSHN LVSRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.3	1e-27	SRS family protein