PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004085.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 174aa    MW: 19557.1 Da    PI: 9.9176
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004085.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.51.5e-152789157
                               TT--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  1 rrkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               rr+R+t+t++q+++L++lF++   r p+ e+ +++  +l    +++ ++V++WF N+Ra+ek+
  Rmu_sc0004085.1_g000003.1 27 RRSRWTPTTDQIRILKALFYNkgVRSPTVEQVQRIYLQLkwygKIEFKNVYFWFVNQRAREKQ 89
                               89******************7789*************************************97 PP
2Wus_type_Homeobox88.19e-292891365
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               r+RWtPt++Qi+iL++l++ +G+r+P+ e++qri  +L+ yGkie kNV++WF N++aRe+qk+
  Rmu_sc0004085.1_g000003.1 28 RSRWTPTTDQIRILKALFYnKGVRSPTVEQVQRIYLQLKWYGKIEFKNVYFWFVNQRAREKQKK 91
                               79**************98769*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MEPQTQQPTE DGGSNKSTGS SANMLCRRSR WTPTTDQIRI LKALFYNKGV RSPTVEQVQR  60
IYLQLKWYGK IEFKNVYFWF VNQRAREKQK KTSTSDVHVP MQRSELVGGS IMEQRGEDHQ  120
EIKTLALFPM HGEDIFGNMK TTSDGGGGHG GGSHISLELS LSCEGKAGKS FLSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.14e-25WOX family protein