PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004085.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 193aa    MW: 21584.1 Da    PI: 8.4868
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004085.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox47.72.6e-153190356
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                               +R+ +t++q+++L+el+     +  + e+ ++++ +l    +++ ++V++WFqN+Ra+ek
  Rmu_sc0004085.1_g000008.1 31 TRWLPTTDQIRILKELYDDkgVKSSTVEQVQRITLQLkwygQIENKNVFYWFQNQRAREK 90
                               7*****************65699************************************9 PP
2Wus_type_Homeobox92.44.1e-303093365
          Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               +tRW Pt++Qi+iL+ely+ +G+++ + e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k+
  Rmu_sc0004085.1_g000008.1 30 NTRWLPTTDQIRILKELYDdKGVKSSTVEQVQRITLQLKWYGQIENKNVFYWFQNQRAREKLKK 93
                               79****************989****************************************885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEPQNRHPTE DGGSNKAAES SPNMHCKQCN TRWLPTTDQI RILKELYDDK GVKSSTVEQV  60
QRITLQLKWY GQIENKNVFY WFQNQRAREK LKKKNLTSDV QVPKQRSGLV GGSINLNFGS  120
TSSADVGGSI MEQRGEDHQE VKTLPLFPMH SEDIFGNMKT TSDGGGGHGD GSHISLELSL  180
SCEGKAEKSF RSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.19e-27WOX family protein