PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004132.1_g000020.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 217aa    MW: 24749 Da    PI: 7.0073
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004132.1_g000020.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.7e-181466148
                               TSSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqkyl 48
                               +g+WT+eEde+lv++++q+G g        ++Ia ++  gRt++++k++w+++l
  Rmu_sc0004132.1_g000020.1 14 KGPWTPEEDEKLVQYIQQHGHGswralpKLAAIATHLD-GRTDNEIKNFWNTHL 66
                               79********************7777777778888888.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MGKSPCCDEP GLKKGPWTPE EDEKLVQYIQ QHGHGSWRAL PKLAAIATHL DGRTDNEIKN  60
FWNTHLKKKL IQMGIDPMTH QPTTDLFSNL QDLLPLQFQT LDQLAATTLH DAAEAVAQLV  120
KLQYLHQQYV LGSNHISAAQ PPSLTNEAEY VKRRNQSITW NHYMRMTNLD NSKMAKFKAK  180
WKYCPQAYAC NSKENGDDID ENSYDVPVKE VPNIYPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.19e-51MYB family protein