PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004250.1_g000041.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 219aa MW: 23506.1 Da PI: 6.7984

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004250.1_g000041.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	47	9.6e-15	58	105	26	73
TCP 26 aecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 +++ ++f+d+qd LG+d++sk+++WL+++ak+a ++l ++++ ++ Rmu_sc0004250.1_g000041.1 58 VHITIQFYDVQDWLGYDRPSKAVDWLIKKAKAATDKLDVPWNQNSISV 105 6899********************************998855555333 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MPSVQASLVE VGGLLLPPPP VKSWRLKATF QGPPAGRTTT PRSAPPKAPG TTASGSQVHI 60 TIQFYDVQDW LGYDRPSKAV DWLIKKAKAA TDKLDVPWNQ NSISVQTTSS PMVPISAAQA 120 LHFSMVEAPS SLFANMRGAM VGTSRVAELV NQNSSNFLQV RMVWRPKLLI FVCLQLPLIE 180 VGLKAKVVGL TDEVVGEDGV EVVLHVENDG EDGGVGLEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	7e-16	TCP family protein