PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004283.1_g000068.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 251aa MW: 27256.9 Da PI: 4.6842

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004283.1_g000068.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	46.1	8.6e-15	39	99	3	57
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+t+t++ql++L+el++ ryp+ e+++e+ +l +++++++++ FqN +a+ek+ Rmu_sc0004283.1_g000068.1 39 NRWTPTPNQLRILKELYYDkeLRYPTPEQIQEICLHLkqygQIEDKNIFFLFQNLKAREKQ 99 7**************95459***********************************97 PP
2	Wus_type_Homeobox	86.5	2.9e-28	37	100	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RWtPtp+Q++iL+ely+ + lr P+ e+iq+i +L++yG+iedkN+f+ FQN kaRe+qk Rmu_sc0004283.1_g000068.1 37 TNNRWTPTPNQLRILKELYYdKELRYPTPEQIQEICLHLKQYGQIEDKNIFFLFQNLKAREKQK 100 689*************98799**************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MEPLTLQLME LQTQQPIEEG GSNQAAGSSA NTPIRQTNNR WTPTPNQLRI LKELYYDKEL 60 RYPTPEQIQE ICLHLKQYGQ IEDKNIFFLF QNLKAREKQK MRLIRNVRVG GSLDLNFGST 120 SSTDDGGSID LNFGSTGSTG ADGSVDLNFG SWASHSVDPY SSSPFNTNTS TTSFGTTGGQ 180 TFMEQRGGDH QEVKTLPLFP LHGEDVLGNP KTTSEEGSAY GYYSGGSGGY NSGSHVSLEL 240 SLNPSGAADL A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-24	WOX family protein