PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004296.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 224aa    MW: 24676 Da    PI: 7.8289
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004296.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.24.4e-141458146
                               TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqk 46
                               rg+W++eEd  l+++ +++G+  +W t + + g  Rt++++k++w++
  Rmu_sc0004296.1_g000008.1 14 RGPWSPEEDATLKNYLHEHGTTgNWITLPTRAG--RTDNDVKNYWNT 58
                               89*******************9**********8..**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGRAPCCDKS KVKRGPWSPE EDATLKNYLH EHGTTGNWIT LPTRAGRTDN DVKNYWNTKL  60
KKKLLAVAAR NNIVATRQTC DHNIAQFSAP VPPKIETPHG PETSSCLGGT LPYAANISLV  120
RSFDQPKQTF EPWCKPCNHS DSKPMEVSDF GSISESNSFS IPLSHQEVSS LRPVHPVRLS  180
WISTIAPCGL DMKVSITLTA SEFLMDFGFE TPPGDHFLLG GFGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36890.16e-21MYB family protein