PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004324.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 786aa MW: 87044.9 Da PI: 6.3396

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004324.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.1	3.5e-09	538	575	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + Rmu_sc0004324.1_g000004.1 538 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 575 664459******************************88 PP
2	BELL	126.6	9.2e-41	400	471	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+k +kLls+l+eVd+rYk+y++q+q+v+ssF+a+ag g+akpYt++Al++iSrhFrcL+dai++qi Rmu_sc0004324.1_g000004.1 400 EKQELQNKLTKLLSMLDEVDRRYKHYYQQMQIVVSSFDAIAGSGAAKPYTAVALQTISRHFRCLRDAITGQI 471 689********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 786 aa Download sequence
MITNFRWCQK PITQISDRGD PSGQSHPSIT EPLDIHVRES QENTLFLWLN KRLVLGIGKC 60 LVPRGLCLSD RVLFSKTDFP VPPKHPTTVT GFQFFWVGYV ICVNTTGRED FKVETNMATY 120 YTNSNNQKDG TPMLYSREPL TSSYPETPVL PGNMMMYMNS GSYSDALAGS SQQQNNCIEV 180 VSSVGASDSN TQQQDVLSHL GGSRIGEQGF NAWRDSRNEM LVTNPMDGSA AILHGGQNLQ 240 GQGLSLSLSS GMQVPSMSYR NPNMGFASFL SPNPSLSTEG RNGTFRDDQP RNVEYLQPSF 300 LGGNADSSKG DLSPYGMSSI ARNVPNSKYL KAAQQLLDEV VNVQKALKQR DREKNESTNE 360 HMMKSFKEGD DGSKNELESG ESSNPQESAS NSSCELSHAE KQELQNKLTK LLSMLDEVDR 420 RYKHYYQQMQ IVVSSFDAIA GSGAAKPYTA VALQTISRHF RCLRDAITGQ IRATQKSLGE 480 QGTSGSIKGV GITRLRFVDQ QLRQQRALQQ LGMMQQHAWR PQRGLPESSV SILRAWLFEH 540 FLHPYPKDSD KIMLARQTGL TRSQVSNWFI NARVRLWKPM VEEMYKEEAG DAEMDSNSSS 600 ENAPQTKKGE KRTLEDGGED MQPSASSTGT DRCSTGQFMD SKPDHYDVEM AGSTGSASFQ 660 NGTRREAEAE FGLVKLRQGE RPGMDESSFF TDGMVQSDRS SERFMAAYHM RELGRFGSGS 720 GVSLTLGLQH CDGGNIPISS GTPHSFVAMR DDDLYNAAAS SVGSETADFD QQHRFGSSHL 780 LRDFVV

Sequence ? help Back to Top

Protein Sequence Length: 786 aa Download sequence

MITNFRWCQK PITQISDRGD PSGQSHPSIT EPLDIHVRES QENTLFLWLN KRLVLGIGKC  60
LVPRGLCLSD RVLFSKTDFP VPPKHPTTVT GFQFFWVGYV ICVNTTGRED FKVETNMATY  120
YTNSNNQKDG TPMLYSREPL TSSYPETPVL PGNMMMYMNS GSYSDALAGS SQQQNNCIEV  180
VSSVGASDSN TQQQDVLSHL GGSRIGEQGF NAWRDSRNEM LVTNPMDGSA AILHGGQNLQ  240
GQGLSLSLSS GMQVPSMSYR NPNMGFASFL SPNPSLSTEG RNGTFRDDQP RNVEYLQPSF  300
LGGNADSSKG DLSPYGMSSI ARNVPNSKYL KAAQQLLDEV VNVQKALKQR DREKNESTNE  360
HMMKSFKEGD DGSKNELESG ESSNPQESAS NSSCELSHAE KQELQNKLTK LLSMLDEVDR  420
RYKHYYQQMQ IVVSSFDAIA GSGAAKPYTA VALQTISRHF RCLRDAITGQ IRATQKSLGE  480
QGTSGSIKGV GITRLRFVDQ QLRQQRALQQ LGMMQQHAWR PQRGLPESSV SILRAWLFEH  540
FLHPYPKDSD KIMLARQTGL TRSQVSNWFI NARVRLWKPM VEEMYKEEAG DAEMDSNSSS  600
ENAPQTKKGE KRTLEDGGED MQPSASSTGT DRCSTGQFMD SKPDHYDVEM AGSTGSASFQ  660
NGTRREAEAE FGLVKLRQGE RPGMDESSFF TDGMVQSDRS SERFMAAYHM RELGRFGSGS  720
GVSLTLGLQH CDGGNIPISS GTPHSFVAMR DDDLYNAAAS SVGSETADFD QQHRFGSSHL  780
LRDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-114	TALE family protein