PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004339.1_g000031.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 337aa    MW: 36871.6 Da    PI: 6.3559
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004339.1_g000031.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.81.3e-154897255
                               HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                        HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                               r +h+  E+rRR++iN++f+ Lr+l+P++     +K + a+ L +++eY+++Lq
  Rmu_sc0004339.1_g000031.1 48 RSKHSVTEQRRRSKINERFQILRDLIPHS----EQKRDTASFLLEVIEYVQYLQ 97
                               899*************************8....79******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MRSAGKGSQE EDEYEDEDFG SKKDGPSSNS SNPNSKDAKS NDKASAIRSK HSVTEQRRRS  60
KINERFQILR DLIPHSEQKR DTASFLLEVI EYVQYLQERV NKHEGSCQGW SAEPTKLMPW  120
RNSHWRVQSF VGPPQPIKND TGVISPFPGK FDENNISITP NILANSTKNP VESEPSRDVA  180
SKVMDQPPEI VNKGLPPPMP LPENLLPPVR NDGILARPLH GPISDAQSTQ CPTTSGDALN  240
QREELTIEGG TISISSVYSQ GLLNSLSHAL QTAGVDLSQA SVSVQIDLGN RANRGLSAGT  300
PASKDHENPH SSNQTMAHFR DAGSGDDSDQ AHKRLKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-101bHLH family protein