PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004359.1_g000041.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

GRF

Protein Properties

Length: 370aa MW: 41863.1 Da PI: 8.4876

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004359.1_g000041.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.7	2.4e-24	70	113	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CErH+hrg++rsrk++e Rmu_sc0004359.1_g000041.1 70 DPEPGRCRRTDGKKWRCSKEAFADSKYCERHMHRGKNRSRKPVE 113 79***************************************987 PP
2	QLQ	61.5	2.3e-21	4	39	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+q+L++Q+l+yKy++++ P+Pp+Ll+ i++ Rmu_sc0004359.1_g000041.1 4 PFTPSQWQELEHQALIYKYMVSGIPIPPDLLFSIKR 39 8*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence
MRFPFTPSQW QELEHQALIY KYMVSGIPIP PDLLFSIKRS CLDSPPLSSK LFSPHIGWNC 60 FQMGLGRKID PEPGRCRRTD GKKWRCSKEA FADSKYCERH MHRGKNRSRK PVEVFKATPP 120 TSANSHSNSN SSTSPITKIF NSPSNSLSTP FHSLSSLSPN ESYNSSSSAH LDDHHFLYSR 180 PNMGFSQQER GTSLFLESAS YNNNPLHPNL EYRSNRFGYG VKEDVDEHAF FSEPSGSVRG 240 FSGSSSSLDH HQNESNWQLT MSCSNSSSKQ RTCSALQTEQ YPHLQLQNFS DSKMERREET 300 QRTIHHFFDE GPPKERDSSW LDLDGNNKSS NSGSVSTTRL SISIPNSAHD FPIFNSRNHQ 360 GNSFLPLGLN

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence

MRFPFTPSQW QELEHQALIY KYMVSGIPIP PDLLFSIKRS CLDSPPLSSK LFSPHIGWNC  60
FQMGLGRKID PEPGRCRRTD GKKWRCSKEA FADSKYCERH MHRGKNRSRK PVEVFKATPP  120
TSANSHSNSN SSTSPITKIF NSPSNSLSTP FHSLSSLSPN ESYNSSSSAH LDDHHFLYSR  180
PNMGFSQQER GTSLFLESAS YNNNPLHPNL EYRSNRFGYG VKEDVDEHAF FSEPSGSVRG  240
FSGSSSSLDH HQNESNWQLT MSCSNSSSKQ RTCSALQTEQ YPHLQLQNFS DSKMERREET  300
QRTIHHFFDE GPPKERDSSW LDLDGNNKSS NSGSVSTTRL SISIPNSAHD FPIFNSRNHQ  360
GNSFLPLGLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-54	GRF family protein