PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004488.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

BES1

Protein Properties

Length: 695aa MW: 77720.9 Da PI: 5.8682

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004488.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	144.7	8.3e-45	78	213	1	130
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl...ee 78 gg++r ++ +E+E++k RER+RRai+aki+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtty+ +g +p ++ Rmu_sc0004488.1_g000006.1 78 GGARRCRPLEEKERTKIRERQRRAITAKILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTYPsnsQGPRPAgvsST 161 6899***************************************************************965566666676334 PP DUF822 79 aeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsisl 130 a++ ss+ +s++++++++ ++s +s ve+ + +ks+ +p++s +d s+ Rmu_sc0004488.1_g000006.1 162 AATSSSSQMMSQTTPVSLKGVTSGYQSSVEHNAGHMKSVFMPASSPYDLPSI 213 44444555588999999999999********************9997765 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MATDIQRLIG TSEEDDEEEM DMDVKEEGDG DDDEDVEKHV DSTPMMIGVD GGMATSSCNN 60 NRFQQHQQMQ EVGTPGGGGA RRCRPLEEKE RTKIRERQRR AITAKILAGL RRHGNYNLRV 120 RADINDVIAA LAREAGWVVL PDGTTYPSNS QGPRPAGVSS TAATSSSSQM MSQTTPVSLK 180 GVTSGYQSSV EHNAGHMKSV FMPASSPYDL PSIITGDGGD QTQSHPLIGG SMDNVGDKQI 240 VDMPQKLPER DFANTAYIPV YVMLPLGVIN MKCELVDPDG LLKQLRVLKS VNVDGVMVDC 300 WWGIVEGHAP LEYNWNGYKR LFQMVRDLKL KLQVVMSFHE CGGNVGDDVC ITLPHWVAEI 360 GRSNPDIFFT DRAGRRNPEC LSWGIDKERV LRGRTAVEVY FDCMRSFRVE FDEFFQDGII 420 SMIQVGLGPC GELRFPSCTV KHGWRYPGIG EFQCYDQYLL KSLRKAAEAR GHSFWGRGPD 480 NAGSYNSRPH ESGFFCDGGD YDGYYGRFFL NWYSRVLVDH GDRVLSLAKL AFDGTCIAAK 540 LSGIHWWYKT PSHAAELTAG FYNPCNRDGY AAIMMMLKKH GASLNLVCTQ LHMLDQNIDF 600 QEAMGDPEGL FWQVLNAAWD VCVPVSSENA LLCHGRVGYN KILDNSKPLT DPDGRHLSSF 660 TYLRLSPLLM ERHNFMEFDR FVKRMHGEAV LDLHV

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MATDIQRLIG TSEEDDEEEM DMDVKEEGDG DDDEDVEKHV DSTPMMIGVD GGMATSSCNN  60
NRFQQHQQMQ EVGTPGGGGA RRCRPLEEKE RTKIRERQRR AITAKILAGL RRHGNYNLRV  120
RADINDVIAA LAREAGWVVL PDGTTYPSNS QGPRPAGVSS TAATSSSSQM MSQTTPVSLK  180
GVTSGYQSSV EHNAGHMKSV FMPASSPYDL PSIITGDGGD QTQSHPLIGG SMDNVGDKQI  240
VDMPQKLPER DFANTAYIPV YVMLPLGVIN MKCELVDPDG LLKQLRVLKS VNVDGVMVDC  300
WWGIVEGHAP LEYNWNGYKR LFQMVRDLKL KLQVVMSFHE CGGNVGDDVC ITLPHWVAEI  360
GRSNPDIFFT DRAGRRNPEC LSWGIDKERV LRGRTAVEVY FDCMRSFRVE FDEFFQDGII  420
SMIQVGLGPC GELRFPSCTV KHGWRYPGIG EFQCYDQYLL KSLRKAAEAR GHSFWGRGPD  480
NAGSYNSRPH ESGFFCDGGD YDGYYGRFFL NWYSRVLVDH GDRVLSLAKL AFDGTCIAAK  540
LSGIHWWYKT PSHAAELTAG FYNPCNRDGY AAIMMMLKKH GASLNLVCTQ LHMLDQNIDF  600
QEAMGDPEGL FWQVLNAAWD VCVPVSSENA LLCHGRVGYN KILDNSKPLT DPDGRHLSSF  660
TYLRLSPLLM ERHNFMEFDR FVKRMHGEAV LDLHV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein