PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004525.1_g000013.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family BES1
Protein Properties Length: 241aa    MW: 26126.4 Da    PI: 8.221
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004525.1_g000013.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8221411.1e-43631962139
                     DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagss 85 
                                 +gr++++kE+E++k+RER RR i+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGwvve DGttyr+  +p+    ++g  
  Rmu_sc0004525.1_g000013.1  63 KGGRREREKEKERTKLRERLRRSITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEVDGTTYRQ--SPP----QIGGA 140
                                589******************************************************************4..455....34444 PP

                     DUF822  86 asaspesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpv 139
                                 s+s  s    +++s  +a+   + s++ + ++++sp+slds+ + ++    ++++p+
  Rmu_sc0004525.1_g000013.1 141 YSMSLRSVE--TPVSGVKAALECHPSSVVRIDESLSPASLDSVVIGEKnekfSNSSPA 196
                                555555442..35667778888888999999************999885555333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MNDESLRQDL DPQSDQSSDY LPPQPHHPLP SQPQPHPQPR RPRGFAATAA AGSVGPVSPS  60
STKGGRRERE KEKERTKLRE RLRRSITSRM LAGLRQYGNF PLPARADMND VLAALAREAG  120
WVVEVDGTTY RQSPPQIGGA YSMSLRSVET PVSGVKAALE CHPSSVVRID ESLSPASLDS  180
VVIGEKNEKF SNSSPAMNSV NCLETDQLMQ HIPSAAGFAP APYVPLYVTL AVSGFYPPSL  240
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.14e-43BES1 family protein