PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004571.1_g000019.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HB-other

Protein Properties

Length: 198aa MW: 21214.1 Da PI: 4.6583

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004571.1_g000019.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.5	1.7e-06	30	59	2	31
T--SS--HHHHHHHHHHHHHSSS--HHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeere 31 ++R+t+t++q+++L+el++ + +++a+e++ Rmu_sc0004571.1_g000019.1 30 STRWTPTPDQIRILKELYYDKENLKAREKQ 59 58******************9999998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MEPQTQQLIE DGGSNQAAGS SANTPIRQSS TRWTPTPDQI RILKELYYDK ENLKAREKQM 60 KRLNRNVRVP MGTSSSSVGG SIDLNFGSTS STDDGGSIDL NFGSTSSTGA DGSIDLNFGS 120 WVGYRGQTFM EQQREDHQQI ETLPLFPMHG EDVLGNLKTT SKGGSGYGYY SGGSGSYNGG 180 SYVSFELSLN PSGAADLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	5e-08	WOX family protein