PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004598.1_g000010.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 257aa    MW: 28007.6 Da    PI: 4.5491
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004598.1_g000010.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.83.4e-1747107357
                                --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox   3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                                +R+t+t+ ql++L+ l++   ++yp+ e+++e+  +l    ++++++V++WFqN +a++++
  Rmu_sc0004598.1_g000010.1  47 NRWTPTPAQLRILQGLYYDkgHKYPTPEQIQEICLHLklygQIEDKNVFFWFQNLKARDRQ 107
                                7****************9557*************************************996 PP
2Wus_type_Homeobox932.8e-3045108264
          Wus_type_Homeobox   2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 
                                +++RWtPtp Q++iL+ ly+ +G + P+ e+iq+i  +L+ yG+iedkNVf+WFQN kaR+rqk
  Rmu_sc0004598.1_g000010.1  45 TTNRWTPTPAQLRILQGLYYdKGHKYPTPEQIQEICLHLKLYGQIEDKNVFFWFQNLKARDRQK 108
                                579***************9889*****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MEPRTLQLIE LQTQQQMELQ AQQQVEDGGN NQAAGSSANT PIRPTTNRWT PTPAQLRILQ  60
GLYYDKGHKY PTPEQIQEIC LHLKLYGQIE DKNVFFWFQN LKARDRQKLK EFRKVRVGGS  120
LDLNFGSTSS TDDGRSIDLN FGSTGSTGDD RSIDLTFGSC VGYGVDPYSS SPFNTNTRTT  180
SFGTTGGQSS MEQQGGDHQE VETLPLFPEH GEDVLGNPKT TSEEGSAFGY YSGGSGGYNS  240
GSPVSLELSL NPSGAAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.16e-21WOX family protein