PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004602.1_g000048.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 201aa MW: 22409.5 Da PI: 7.1785

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004602.1_g000048.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	106	164	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYG+K+vk+s++pr+YY+C+sagC vkk+ver++ed ++v++tYeg Hnh+ Rmu_sc0004602.1_g000048.1 106 MDDGFKWRKYGKKSVKNSPNPRNYYKCSSAGCDVKKRVERDREDSSYVITTYEGMHNHD 164 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MDSNPSWSNC APFGENQLDP NSMNFDELSE YLMLDYRVDD HQDSSSLRMI SPETRHSTAA 60 AAAGSSSATS RNSSTNINAA TMKNSKREAG HGHRVAFRTK SELEIMDDGF KWRKYGKKSV 120 KNSPNPRNYY KCSSAGCDVK KRVERDREDS SYVITTYEGM HNHDTPNCVQ LHFNPAALVV 180 DVDPNNVWTT LRASSQSSAS S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	1e-41	WRKY family protein